Web Server

Here we provide a concise online analysis service to visualize the distribution of variants, users only need to submit SNP, PAV bed format files, and we can perform visual analysis on the submitted data. We can visualize based on the SNP and PAV information data of two to three genomes, of which SNP data is necessary, and PAV data is optional.And the names of the respective genomes in the visualization results can be corresponding to the prefixes of the SNP files.

If you don't have a test file at hand, you can also just hit submit and we'll show you with our sample file. Sample files are downloaded here.

Upload Files

SNP1:

eg: rice_ZS97_snps.bed

PAV1:

eg: rice_ZS97_PAV.bed

Name1:

eg: ZS97

SNP2:

eg: rice_MH63_snps.bed

PAV2:

eg: rice_NH63_PAV.bed

Name2:

eg: MH63

SNP3:

eg: xxx.bed

PAV3:

eg: xxx.bed

Name3:

eg: xxx

About Parameters

SNP(1,2,3): Input the SNP file of genome1,2,3, which uses the bed format to map the SNP distribution of genome1,2,3.

PAV(1,2,3): Input the PAV file of genome1,2,3, which uses the bed format to map the PAV distribution of genome1,2,3.

Name(1,2,3): Set the name of the genome1,2,3.